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GNU Regression, Econometrics and Time-series Library
Features
- A wide variety of least-squares-based estimators (including two-stage
least squares).
- Easy, intuitive interface.
- Single commands to launch things like augmented Dickey-Fuller test, Chow
test for structural stability, Vector Autoregression.
- Reads own format ascii data files, Comma Separated Values files, BOX1
files, own format binary databases (allowing mixed data frequencies and
series lengths) and RATS 4 databases. Includes a US macro database and a
perl script to create a database off economagic.com. See also the gretl
data page.
- Output models as LaTeX files, in tabular or equation format (not very
flexible yet).
- Integrated scripting language: enter commands either via the gui or via
scripts.
- Command loop structure for Monte Carlo simulations.
- GUI controller for fine-tuning Gnuplot graphs.
- Link to GNU R for further data analysis.
mp3riot (formerly known as f2html.pl) is a command line utility
that searches recursively through directories, builds a file list
(with additional file information), and generates HTML files,
playlists, etc. The output can be controlled, links can be corrected,
and more. The script is mainly designed to create Web pages,
playlists, and databases for MP3 and Ogg files, but can also used for
other purposes.
Bio::ASN1::EntrezGene is a regular expression-based Perl Parser for NCBI
Entrez Gene genome databases [1]. It parses an ASN.1-formatted Entrez Gene
record and returns a data structure that contains all data items from the
gene record.
[1] http://www.ncbi.nih.gov/entrez/query.fcgi?db=gene
The parser will report error & line number if input data does not conform
to the NCBI Entrez Gene genome annotation file format.
PyCogent is a software library for genomic biology. It is a fully integrated
and thoroughly tested framework for: controlling third-party applications;
devising workflows; querying databases; conducting novel probabilistic
analyses of biological sequence evolution; and generating publication quality
graphics. It is distinguished by many unique built-in capabilities (such as
true codon alignment) and the frequent addition of entirely new methods for
the analysis of genomic data.
SSAHA is a software tool for very fast matching and alignment of DNA
sequences. It stands for Sequence Search and Alignment by Hashing
Algorithm. It achieves its fast search speed by converting sequence
information into a `hash table' data structure, which can then be
searched very rapidly for matches.
SSAHA: a fast search method for large DNA databases (2001).
Ning Z, Cox AJ, Mullikin JC. Genome Res. 11: 1725-9.
PMID: 11591649
Class::ObjectTemplate::DB extends Class::ObjectTemplate in one
simple way: the undefined() method.
The author finds this useful when representing classes based on
objects stored in databases (hence the name of the module).
That way an object can be created, without triggering a DB lookup.
Later if data is accessed and it is not currently present in the object,
it can be retrieved on an as-need basis.
DRI stands for Domain Registration Interface and aims to be,
for domain name registries/registrars/resellers
what Perl DBI is for databases.
Net::DRI offers a uniform API to access services.
It can be used by registrars to access registries.
It can be used by clients to access registrars and/or resellers.
It can be used by anonyone to do whois, DAS or IRIS DCHK queries.
gseen.mod
gseen works similar to countless seen scripts. It logs for each user
when he or she was last seen in the channel and makes this information
publically available. It takes switching nick names into consideration
and supports wildcards in search-requests.
The advantage of gseen in contrast to most other seen scripts is it's speed.
gseen can handle databases of several thousand nicks without a lag in seen
requests. It also supports several languages.
Bogofilter is a trainable email spam detector.
Bogofilter takes an email message or other text on standard input, parses it
into words, does a statistical check against databases of "good" and "bad"
words, and returns a status code indicating whether or not the message is spam.
Bogofilter decodes base64 or quoted-printable encoded texts and ignores non-text
attachments and HTML comments.
The supported database backends are Berkeley DB, QDBM and SQLite3.