Consed is a tool for viewing and editing sequence assemblies made by phrap,
and includes Autofinish which will automatically choose finishing reads.
A standalone program for mapping and aligning cDNA sequences to a
genome. The program maps and aligns a single sequence with minimal
startup time and memory requirements, and provides fast batch
processing of large sequence sets. The program generates accurate
gene structures, even in the presence of substantial polymorphisms
and sequence errors, without using probabilistic splice site models.
Methodology underlying the program includes a minimal sampling
strategy for genomic mapping, oligomer chaining for approximate
alignment, sandwich DP for splice site detection, and microexon
identification with statistical significance testing.
p5-Bio-Das-Lite is an implementation of a client for the DAS protocol (XML
over HTTP primarily for biological-data).
Bioperl-run contain modules that provides a PERL interface to various
bioinformatics applications. This allows various applications to be used
with common Bioperl objects.
Samtools implements various utilities for post-processing alignments in the
SAM, BAM, and CRAM formats, including indexing, variant calling (in conjunction
with bcftools), and a simple alignment viewer.
A set of tools written in Perl and C++ for working with VCF files, such as
those generated by the 1000 Genomes Project.
FreeCAD is a general purpose parametric 3D modeler.
FreeCAD is aimed directly at mechanical engineering and product
design but also fits in a wider range of uses around engineering,
such as architecture or other engineering specialties.
FreeCAD features tools similar to Catia, SolidWorks or Solid Edge,
and therefore also falls into the category of MCAD, PLM, CAx and
CAE. It is a feature based parametric modeler with a modular software
architecture which makes it easy to provide additional functionality
without modifying the core system.
FreeCAD is under heavy development and might not be
ready for production use.
Kicad is an open source (GPL) software for the creation of electronic schematic
diagrams and printed circuit board artwork.
Designed and written by Jean-Pierre Charras, a researcher at LIS (Laboratoire
des Images et des Signaux) and a teacher in IUT de Saint Martin d'Heres
(France), in the field of electrical engineering and image processing.
Kicad is a set of four softwares and a project manager:
* Eeschema: Schematic entry.
* Pcbnew: Board editor.
* Gerbview: GERBER viewer (photoplotter documents).
* Cvpcb: footprint selector for components used in the circuit design.
* Kicad: project manager.
Kicad is an open source (GPL) software for the creation of electronic schematic
diagrams and printed circuit board artwork.
Designed and written by Jean-Pierre Charras, a researcher at LIS (Laboratoire
des Images et des Signaux) and a teacher in IUT de Saint Martin d'Heres
(France), in the field of electrical engineering and image processing.
Kicad is a set of four softwares and a project manager:
* Eeschema: Schematic entry.
* Pcbnew: Board editor.
* Gerbview: GERBER viewer (photoplotter documents).
* Cvpcb: footprint selector for components used in the circuit design.
* Kicad: project manager.
FreeWnn 是一个日文、中文、韩文输入法。
这个 port 仅含有中文输入法所需的服务端和字典。
-- S. Taoka
<taoka@FreeBSD.org>