"The SEQIO package is a set of C functions which can read and write
biological sequence files formatted using various file formats and which
can be used to perform database searches on biological databases."
- from the README file
A suite of tools for visualising sequence alignments.
Blixem is an interactive browser of pairwise alignments that have
been stacked up in a "master-slave" multiple alignment; it is not
a 'true' multiple alignment but a 'one-to-many' alignment.
Belvu is a multiple sequence alignment viewer and phylogenetic tool.
It has an extensive set of user-configurable modes to color residues
by conservation or by residue type, and some basic alignment editing
capabilities.
Dotter is a graphical dot-matrix program for detailed comparison
of two sequences. Every residue in one sequence is compared to every
residue in the other, with one sequence plotted on the x-axis and
the other on the y-axis.
SSAHA is a software tool for very fast matching and alignment of DNA
sequences. It stands for Sequence Search and Alignment by Hashing
Algorithm. It achieves its fast search speed by converting sequence
information into a `hash table' data structure, which can then be
searched very rapidly for matches.
SSAHA: a fast search method for large DNA databases (2001).
Ning Z, Cox AJ, Mullikin JC. Genome Res. 11: 1725-9.
PMID: 11591649
Electric is a sophisticated electrical CAD system that can handle
many forms of circuit design, including:
Custom IC layout (ASICs)
Schematic drawing
Hardware description language specifications
Electro-mechanical hybrid layout
(snip, this is an edited version of Electric's homepage)
Electric handles these file formats:
CIF I/O
GDS I/O
VHDL I/O
DXF I/O
PostScript, HPGL, and QuickDraw output
For real functionality, one should consider installing
support simulation software such as cad/spice.
FEAPpv is a general purpose finite element analysis program which is
designed for research and educational use. The program is described in the
references:
The Finite Element Method, 6th ed., Vols. 1 and 2, by O.C. Zienkiewicz and
R.L. Taylor, Elsevier, Oxford, 2005.
FEAPpv is designed to be compatible for compilation in Unix/Linux and
Windows PC environments.
No support on use of the program will be provided.
Firefly Truetype 字体是两个 arphic 宋体的结合体,并嵌入了 9pt,10pt,11pt位图字体。
Unicode 对一些字符的宽度定义比较模糊。软件根据上下文探测字符的宽度。然而,有些时候很难
或者无法获得其上下文。因此,这个 port 修正一些控制台软件,让他们能够识别所有的 Big5 编
码字符为双宽度。现在你可以开心地使用 UTF8 终端和 Big5 字体了 :)
这个 port 为 wcwidth(3) and wcswidth(3) 修正 zh_TW.UTF-8 locale。
gcin 是一个 X 上的 Gtk 中文输入(Gtk Chinese INput)应用程序,对繁体中文(Big5)字
符有良好的支持。
QE 是一个 U*nix 下的类似 PE2 的编辑器程序(PE2 是一个 PC-DOS 下的编辑器程序),
我给它取名为 QE 是因为 Q 跟在字母 P 后面,希望它能超越 PE2 :-),并且我依据通用
公共许可证(GPL)发布这一程序
描述:
在8位环境下使用 /usr/bin/telnet ,例如,台湾的大五码中文环境。
为了能输入汉字,需要使用“-8”或“-L”参数,但是,使用这些参数会引起了另外一个问题。
指定“-8”或“-L”导致当 telnet 到 SunOS 时 ^U 或 ^C 或 ^D 或 ……(any isprint(c))发生故障。
如何重现:
/usr/bin/telnet -8 ms1.hinet.net (ms1.hinet.net running Solaris)
login: abcde^U (or just press Enter)
=> the terminal state goes wrong, "reset" is needed to go back
to "normal state"
修正:
应用了下面的补丁:
gopher://freebsd.csie.nctu.edu.tw/00%2f3%2fA0002063
这使得 telnet “纯8位”,可以输入8位的数据(汉字)而不需要指定“-8或-L”选项,并且
telne 到 SunOS 没有问题。
参见: