Ports 搜索

Docker is a docking application (WindowMaker dock app) which acts as a system tray for KDE3 and GNOME2. It can be used to replace the panel in either environment, allowing you to have a system tray without running the KDE/GNOME panel.

xrootconsole is a small utility which displays its input in a transparent text box on X's root window. It will read from any file listed on the command line or, by default, from stdin. It is most useful when it reads from a FIFO; this allows you to redirect multiple commands to the FIFO and monitor their output.

XSel is a command-line program for getting and setting the contents of the X selection. Normally this is only accessible by manually highlighting information and pasting it with the middle mouse button. This port is similar to x11/xsel, but with different CLI syntax and a bit more functionality. It is a lot more popular, too.

yalias has a window with two buttons and a text widget. The left button clears the widget (and is bound to the Escape key). The right button matches the contents of the widget against a series of regular expressions that the user has previously specified in their $HOME/.yaliasrc, and executes the specified command if it matches any of them.

GS Krab is a framework and a daemon to enable GNUstep applications to handle the special keys on multimedia keyboards. Since this would require special hacks to work on different platform, and since those differents platforms work differently, I thought putting those hacks together in a centralized daemon would be the correct and clean way to do things. LICENSE: GPL2 or later

LZO is a data compression library which is suitable for data de-/compression in real-time. This means it favours speed over compression ratio. LZO implements a number of algorithms with the following features: + Decompression is simple and *very* fast. + Requires no memory for decompression. + Compression is pretty fast. + Requires 64 kB of memory for compression. + Allows you to dial up extra compression at a speed cost in the compressor. The speed of the decompressor is not reduced. + Includes compression levels for generating pre-compressed data which achieve a quite competitive compression ratio. + There is also a compression level which needs only 8 kB for compression. + Algorithm is thread safe. + Algorithm is lossless.

Audacity is a program that lets you manipulate digital audio waveforms. In addition to letting you record sounds directly from within the program, it imports many sound file formats, including WAV, AIFF, AU, IRCAM, MP3, and Ogg Vorbis. It supports all common editing operations such as Cut, Copy, and Paste, plus it will mix tracks and let you apply plug-in effects to any part of a sound. It also has a built-in amplitude envelope editor, a customizable spectrogram mode and a frequency analysis window for audio analysis applications.

Snd is a sound editor modeled loosely after Emacs and an old, sorely-missed PDP-10 sound editor named Dpysnd. It can accommodate any number of sounds, each with any number of channels, and can be customized and extended using Guile, Ruby or Forth. Included with it are some command-line utilities: - snd-info (note: renamed from sndinfo, for this FreeBSD port) prints a description of a sound file. - sndplay plays a sound file. - sndrecord records sound from a microphone. - audinfo describes the current state of the audio hardware.

From the website: T-Coffee is a multiple sequence alignment package. Given a set of sequences (Proteins or DNA), T-Coffee generates a multiple sequence alignment. Related publications: - 3DCoffee: Combining Protein Sequences and Structures within Multiple Sequence Alignments. O. O'Sullivan, K Suhre, C. Abergel, D.G. Higgins, C. Notredame. Journal of Molecular Biology, Vol 340, pp385-395, 2004 - T-Coffee: A novel method for multiple sequence alignments. C.Notredame, D. Higgins, J. Heringa, Journal of Molecular Biology,Vol 302, pp205-217,2000 - COFFEE: A New Objective Function For Multiple Sequence Alignmnent. C. Notredame, L. Holme and D.G. Higgins,Bioinformatics,Vol 14 (5) 407-422,1998

"Wise2 is package that is focused on comparing DNA sequences at the level of its conceptual translation, regardless of sequencing error and introns. This really is a rewrite of the old wisetools package, which I wrote about 3 years ago. It can compare a single protein or a profile HMM to a genomic DNA sequence, and predict a gene structure. This is algorithm, called genewise, is one of the algorithms available in Wise2. There are other algorithms focused on EST data rather than genomic data, as well as some other algorithm curios." - from the web site (Ewan Birney)