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Pragha is a Lightweight Music Player, based on GTK, and SQLite. Main features: * Full integration with GTK+3 * Library with multiple views, according tags or folder structure * Search, filtering and queue songs on current playlist * Playing and edit tag of mp3, m4a, ogg, flac, asf, wma, and ape files * Playlist management: Exporting M3U and read M3U, PLS, XSPF and WAX playlists. * Playback control with command line Extensible by plugins: * AcoustID: Get metadata on AcoustID service * Global Hotkeys: Control Pragha with multimedia keys * Notification: Show notification when change songs * Get radios: Search radios on TuneIn service

MOC (music on console) is a console audio player designed to be powerful and easy to use. MOC plays smoothly, regardless of system or I/O load, because it handles the output buffer in a separate thread. It does not cause gaps between files, because the next file to be played is pre-cached while playing the current file. Supported file formats are: MP3, Ogg Vorbis, FLAC, Musepack (mpc), Speex, WAVE, AIFF, AU, SVX, Sphere Nist WAV, IRCAM SF, Creative VOC, AAC, MP4, Real, WMA.

libgpod is a shared library to access the contents of an iPod and optionally iPhone (via `comms/libimobiledevice' library port, enabled by default). This code was originally part of gtkpod itself. When the parsing code was made self-contained with gtkpod v0.93, decision was made to put this code in a separate library so that other projects can benefit from it without duplicating code. libgpod supports playlists, smart playlists, playcounts, ratings, podcasts, cover art, audio and video. Photo support is implemented as well. Python and Mono bindings are optionally available too.

TiMidity is a software synthesizer. It can play MIDI files by converting them into PCM waveform data; give it a MIDI data along with digital instrument data files, then it synthesizes them in real-time, and plays. It can not only play sounds, but also can save the generated waveforms into hard disks as various audio file formats. TiMidity 0.2i was written by Tuukka Toivonen <tt@cgs.fi> in 1995. No new version of this project has been released since then. Development has been continued by Masanao Izumo et al. in the new project named TiMidity++ (audio/timidity++).

tosha reads CD-DA (digital audio) and CD-XA (digital video) tracks and writes them to the hard disk. Several audio formats are supported: raw PCM (little-endian and big-endian byte order), WAV / RIFF, AIFF and Sun AU. You can also pipe the data directly into an audio or video player. A simple audio player is included ("pcmplay"). To playback VideoCD data, you need a third-party product, for example MpegTV (see http://www.mpegtv.com/). tosha reads the digital audio / video data through the SCSI bus; therefore it does not work with IDE/ATAPI CD-ROM drives nor with proprietary interfaces.

WMRecord is a general purpose audio recording utility that is designed to work in conjunction with WindowMaker's Dock or AfterStep's Wharf. It was originally conceived as a tool for recording memos, interviews and meetings, and this approach is reflected somewhat in the interface. Recordings are made to one of 99 numbered slots or tracks which the user may browse through. There is no limit (other than the constraints of the file system) to the size of the recordings you make. Recordings are automatically saved to disk, but may be erased or recorded over as necessary.

Iozone: 'IO Zone' Benchmark Program (older 2.1 version) Iozone tests the speed of sequential I/O to actual files. Therefore, this measurement factors in the efficiency of your machine's file system, operating system, C compiler, and C runtime library. It produces a measurement which is the number of bytes per second that your system can read or write to a file. This is the 2.1 version of iozone. The new 3.x+ versions of iozone have completely changed their testing methods, thus their output is useless in comparing with older statistics.

The program thrulay is used to measure the capacity, delay, and other performance metrics of a network by sending a bulk TCP or UDP stream over it. Special features of thrulay include: * For TCP, ability to measure round-trip delay along with throughput * For UDP, ability to measure - one-way delay, with quantiles - packet loss - packet duplication - reordering * For UDP, the ability to send precisely positioned true Poisson streams (microsecond errors in sending times) * Human- and machine-readable output (ready to be fed to gnuplot)

Artemis is a DNA sequence viewer and annotation tool that allows visualisation of sequence features and the results of analyses within the context of the sequence, and its six-frame translation. Artemis is written in Java, reads EMBL or GENBANK format sequences and feature tables, and can work on sequences of any size. ACT (Artemis Comparison Tool) is a DNA sequence comparison viewer based on Artemis. It can open two or more sequences (and their annotations/features) together with their comparisons (usually the result of running blastn or tblastx searches).

MAFFT offers a range of multiple alignment strategies, L-INS-i (accurate; recommended for <200 sequences), FFT-NS-i (standard speed and accuracy), FFT-NS-2 (fast; recommended for >2,000 sequences), etc. According to BAliBASE and other benchmark tests, L-INS-i is one of the most accurate methods currently available. MAFFT has been described: K. Katoh and H. Toh 2008 (Briefings in Bioinformatics 9:286-298) Recent developments in the MAFFT multiple sequence alignment program. K. Katoh, K. Misawa, K. Kuma and T. Miyata (Nucleic Acids Res. 30: 3059-3066, 2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.