The idea of IMB is to provide a concise set of elementary MPI
benchmark kernels. With one executable, all of the supported
benchmarks, or a subset specified by the command line, can be run.
The rules, such as time measurement (including a repetitive call
of the kernels for better clock synchronization), message lengths,
selection of communicators to run a particular benchmark (inside
the group of all started processes) are program parameters.
N-queens benchmark written in C. Includes base version and (optinal)
distributed MPI version.
The NCBI (National Center for Biotechnology Information) development toolkit,
containing various libraries needed by NCBI applications, as well as a
software suite containing, amongst other things, NCBI BLAST 2.0.
From the README:
The NCBI Software Development Toolkit was developed for the production and
distribution of GenBank, Entrez, BLAST, and related services by NCBI. We
make it freely available to the public without restriction to facilitate
the use of NCBI by the scientific community. However, please understand
that while we feel we have done a high quality job, this is not commercial
software.
The documentation lags considerably behind the software and we must make
any changes required by our data production needs. Nontheless, many people
have found it a useful and stable basis for a number of tools and
applications.
"Primer3 is a complete rewrite of the original PRIMER program
(Primer 0.5), written by Steve Lincoln, Mark Daly, and Eric
Lander. See DIFFERENCES FROM EARLIER VERSIONS for a discussion
of how Primer3 differs from its predecessors, Primer 0.5 and
Primer v2.
Primer3 picks primers for PCR reactions, considering as criteria:
o oligonucleotide melting temperature, size, GC content,
and primer-dimer possibilities,
o PCR product size,
o positional constraints within the source sequence, and
o miscellaneous other constraints.
All of these criteria are user-specifiable as constraints, and
some are specifiable as terms in an objective function that
characterizes an optimal primer pair."
- from the README file
Xmolwt (Motif version)/Gmolwt (GTK+ version)
This program calculates the formula weight and percent of each element
for a given chemical formula.
This port is builds a GTK+ version of the program. If you want to
use/build a Motif version, then use Makefile.motif which is included in
the ports skeleton.
Kicad is an open source (GPL) software for the creation of electronic schematic
diagrams and printed circuit board artwork.
Designed and written by Jean-Pierre Charras, a researcher at LIS (Laboratoire
des Images et des Signaux) and a teacher in IUT de Saint Martin d'Heres
(France), in the field of electrical engineering and image processing.
Kicad is a set of four softwares and a project manager:
* Eeschema: Schematic entry.
* Pcbnew: Board editor.
* Gerbview: GERBER viewer (photoplotter documents).
* Cvpcb: footprint selector for components used in the circuit design.
* Kicad: project manager.
NTHU-CS Maple BBS 2.36 BBS-like editor
Besides normal functions, it has some great features for programmers --
goto line (ESC-G)
cut & paste cross files (Ctrl-G to see ve.hlp)
block shift left/right (ESC-J/K, Ctrl-G to see ve.hlp)
parenthesis matching (ESC-[)
seaching (Ctrl-S, ESC-n, ESC-p)
(matching start of line, case sensitive/in-sensitive, forward/backward)
undo line (ESC - '-', or ESC-_ )
undelete lines (ESC-u)
...
emacs-like hot-key
ve is a tiny editor, about 60K. It's woju's favorite UNIX editor.
The most obvious weakness of ve is changing TABs into Spaces. So
please don't use ve to edit TAB-important files, such as Makefile,
sendmail.cf, syslog.conf... etc.
This is a port of the JDBC driver which is used to access Oracle 8i
databases using a database-independant API in Java for use with JDK 1.2 and
JDK 1.3.
This is a port of the JDBC driver which is used to access Oracle 9i
databases using a database-independant API in Java for use with JDK 1.4.
PDO driver for Apache Cassandra
Cassandra is a highly scalable, eventually consistent, distributed,
structured key-value store. Cassandra brings together the distributed
systems technologies from Dynamo and the data model from Google's
BigTable. Like Dynamo, Cassandra is eventually consistent. Like
BigTable, Cassandra provides a ColumnFamily-based data model richer
than typical key/value systems.